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  5. Pir_g51223

Pir_g51223


Description : not classified & original description: none


Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g51223
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Als_g26663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62010.t2 Aspi01Gene62010 XRN4-exoribonuclease cofactor *(LARP1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20639 No alias BBX class-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026533 No alias not classified & original description: CDS=108-932 0.04 OrthoFinder output from all 47 species
Sam_g15757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 385 441
No external refs found!