Pir_g51143 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : non-photochemical quenching PsbS protein & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g51143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00154940 NPQ4, PSBS,... Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
AT1G44575 NPQ4, PSBS Chlorophyll A-B binding family protein 0.06 OrthoFinder output from all 47 species
Adi_g083731 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Adi_g083732 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Adi_g083733 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Aev_g49065 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ala_g13911 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Als_g10582 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Aob_g25558 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Aob_g38592 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000408 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cba_g01831 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G021200.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cre01.g016750 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g26756 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00800 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06548 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008866001 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_30734 NPQ4, PSBS non-photochemical quenching PsbS protein 0.05 OrthoFinder output from all 47 species
LOC_Os01g64960.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.05 OrthoFinder output from all 47 species
Len_g07934 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Mp8g05910.1 NPQ4, PSBS non-photochemical quenching PsbS protein 0.03 OrthoFinder output from all 47 species
Msp_g30503 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Msp_g39169 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04085 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ore_g31160 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ore_g32353 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Pnu_g07004 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Ppi_g48261 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Solyc06g060340.3.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.02 OrthoFinder output from all 47 species
Spa_g17275 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Tin_g11495 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.08 OrthoFinder output from all 47 species
Zm00001e019137_P001 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 135 263
No external refs found!