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  5. Pir_g51044

Pir_g51044


Description : plastidial UMP kinase *(PUMPKIN) & original description: none


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g51044

Target Alias Description ECC score Gene Family Method Actions
Ceric.15G071800.1 Ceric.15G071800 plastidial UMP kinase *(PUMPKIN) & original description:... 0.03 OrthoFinder output from all 47 species
Pnu_g07334 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007442 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020257 No alias plastidial UMP kinase *(PUMPKIN) & original description:... 0.03 OrthoFinder output from all 47 species
Smo130301 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e028275_P001 Zm00001e028275 plastidial UMP kinase (PUMPKIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 115 324
No external refs found!