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  5. Pir_g50510

Pir_g50510


Description : not classified & original description: none


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50510
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00264420 evm_27.TU.AmTr_v1... Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00173940 evm_27.TU.AmTr_v1... Cell... 0.04 OrthoFinder output from all 47 species
AT5G33290 XGD1 xylogalacturonan deficient 1 0.02 OrthoFinder output from all 47 species
Aspi01Gene28831.t1 Aspi01Gene28831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_125709g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g13740.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pir_g42108 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g21087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g019050.2.1 Solyc12g019050 xylogalacturonan xylosyltransferase 0.02 OrthoFinder output from all 47 species
Solyc12g062940.3.1 Solyc12g062940 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e015098_P001 Zm00001e015098 xylogalacturonan xylosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e033023_P001 Zm00001e033023 xylogalacturonan xylosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 62 291
No external refs found!