1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g50480

Pir_g50480


Description : not classified & original description: none


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50480
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00067030 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G79160 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT5G22270 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Cba_g03050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g52700.1 LOC_Os04g52700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g20643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011000 No alias not classified & original description: CDS=157-1332 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013146 No alias not classified & original description: CDS=300-1316 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!