AT5G53905


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54062.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0001959 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001959_tree ,
OG_02_0001278 (LandPlants) Phylogenetic Tree(s): OG_02_0001278_tree ,
OG_03_0000661 (SeedPlants) Phylogenetic Tree(s): OG_03_0000661_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53905
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT5G48210 No alias Protein of unknown function (DUF1278) 0.03 Archaeplastida
Solyc12g009850.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g009850.1.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc12g009850.1.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008502 Prolamin-like 27 83
No external refs found!