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Pir_g50258 (ATCHX18, CHX18)


Aliases : ATCHX18, CHX18

Description : proton:monovalent cation antiporter *(CHX) & original description: none


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50258

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00096740 CHX17, ATCHX17,... Solute transport.carrier-mediated transport.CPA... 0.03 OrthoFinder output from all 47 species
Ala_g18621 ATCHX18, CHX18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24905 ATCHX18, CHX18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19476.t1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g11120 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019457001 ATCHX18, CHX18 Cation/H(+) antiporter 18 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g02240.1 ATCHX20, CHX20,... proton:monovalent cation antiporter (CHX) 0.03 OrthoFinder output from all 47 species
MA_117442g0010 ATCHX19, CHX19 proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Mp4g10470.1 ATCHX18, CHX18 proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Msp_g05109 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Msp_g06705 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.05 OrthoFinder output from all 47 species
Msp_g30034 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007322 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g010530.3.1 ATCHX20, CHX20,... proton:monovalent cation antiporter (CHX) 0.03 OrthoFinder output from all 47 species
Zm00001e003244_P001 ATCHX19, CHX19,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 678 802
IPR006153 Cation/H_exchanger 90 472
No external refs found!