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  5. Pir_g50153

Pir_g50153 (iqd8)


Aliases : iqd8

Description : not classified & original description: none


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50153
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158910 iqd9,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00107810 iqd17,... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00027450 IQD6,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G17480 IQD7 IQ-domain 7 0.04 OrthoFinder output from all 47 species
AT3G15050 IQD10 IQ-domain 10 0.02 OrthoFinder output from all 47 species
Ceric.08G062300.1 IQD5, Ceric.08G062300 not classified & original description: pacid=50637998... 0.03 OrthoFinder output from all 47 species
Dac_g00730 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42596 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021166001 iqd9 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g04210.1 IQD20, LOC_Os03g04210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g02866 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007920.2.1 iqd17, Solyc08g007920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g014130.2.1 IQD10, Solyc12g014130 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020006_P001 IQD6, Zm00001e020006 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036466_P001 iqd9, Zm00001e036466 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 117 134
IPR000048 IQ_motif_EF-hand-BS 95 114
No external refs found!