AT5G53300 (UBC10)


Aliases : UBC10

Description : ubiquitin-conjugating enzyme 10


Gene families : OG_01_0000275 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000275_tree ,
OG_02_0000172 (LandPlants) Phylogenetic Tree(s): OG_02_0000172_tree ,
OG_03_0000190 (SeedPlants) Phylogenetic Tree(s): OG_03_0000190_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53300
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00068850 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.03 Archaeplastida
GSVIVT01019484001 No alias Protein degradation.peptide... 0.06 Archaeplastida
GSVIVT01025872001 No alias Protein degradation.peptide... 0.03 Archaeplastida
GSVIVT01027045001 No alias Protein degradation.peptide... 0.03 Archaeplastida
Gb_10818 No alias conjugation E2 protein 0.05 Archaeplastida
LOC_Os01g46926.1 No alias conjugation E2 protein 0.04 Archaeplastida
LOC_Os02g16040.1 No alias conjugation E2 protein 0.02 Archaeplastida
LOC_Os04g57220.2 No alias conjugation E2 protein 0.02 Archaeplastida
MA_10433698g0010 No alias conjugation E2 protein 0.02 Archaeplastida
Mp5g21800.1 No alias conjugation E2 protein 0.03 Archaeplastida
Pp3c14_21480V3.1 No alias ubiquitin-conjugating enzyme 10 0.04 Archaeplastida
Pp3c14_23460V3.1 No alias ubiquitin-conjugating enzyme 10 0.02 Archaeplastida
Pp3c23_500V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.05 Archaeplastida
Pp3c24_130V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.02 Archaeplastida
Smo270384 No alias Protein degradation.peptide... 0.04 Archaeplastida
Solyc06g007510.3.1 No alias conjugation E2 protein 0.08 Archaeplastida
Solyc08g008220.3.1 No alias conjugation E2 protein 0.07 Archaeplastida
Solyc08g081945.1.1 No alias conjugation E2 protein 0.08 Archaeplastida
Solyc12g056100.3.1 No alias conjugation E2 protein 0.05 Archaeplastida
Zm00001e010614_P001 No alias E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.04 Archaeplastida
Zm00001e027992_P001 No alias conjugation E2 protein 0.04 Archaeplastida
AMTR_s00061p00068850 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.02 LandPlants
GSVIVT01019484001 No alias Protein degradation.peptide... 0.06 LandPlants
GSVIVT01025872001 No alias Protein degradation.peptide... 0.03 LandPlants
GSVIVT01027045001 No alias Protein degradation.peptide... 0.03 LandPlants
Gb_10818 No alias conjugation E2 protein 0.05 LandPlants
LOC_Os01g46926.1 No alias conjugation E2 protein 0.04 LandPlants
LOC_Os02g16040.1 No alias conjugation E2 protein 0.02 LandPlants
LOC_Os04g57220.2 No alias conjugation E2 protein 0.02 LandPlants
MA_10433698g0010 No alias conjugation E2 protein 0.02 LandPlants
Mp5g21800.1 No alias conjugation E2 protein 0.03 LandPlants
Mp7g03500.1 No alias conjugation E2 protein. E2 conjugating component COP10... 0.02 LandPlants
Pp3c14_21480V3.1 No alias ubiquitin-conjugating enzyme 10 0.04 LandPlants
Pp3c23_500V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.05 LandPlants
Pp3c8_1130V3.1 No alias ubiquitin conjugating enzyme 9 0.02 LandPlants
Smo270384 No alias Protein degradation.peptide... 0.02 LandPlants
Solyc06g007510.3.1 No alias conjugation E2 protein 0.08 LandPlants
Solyc08g008220.3.1 No alias conjugation E2 protein 0.07 LandPlants
Solyc08g081945.1.1 No alias conjugation E2 protein 0.08 LandPlants
Solyc12g056100.3.1 No alias conjugation E2 protein 0.05 LandPlants
Zm00001e010614_P001 No alias E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.04 LandPlants
Zm00001e027992_P001 No alias conjugation E2 protein 0.04 LandPlants
AMTR_s00061p00068850 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.02 SeedPlants
GSVIVT01019484001 No alias Protein degradation.peptide... 0.05 SeedPlants
GSVIVT01025872001 No alias Protein degradation.peptide... 0.03 SeedPlants
GSVIVT01027045001 No alias Protein degradation.peptide... 0.03 SeedPlants
Gb_10818 No alias conjugation E2 protein 0.05 SeedPlants
LOC_Os01g46926.1 No alias conjugation E2 protein 0.04 SeedPlants
LOC_Os02g16040.1 No alias conjugation E2 protein 0.02 SeedPlants
LOC_Os04g57220.2 No alias conjugation E2 protein 0.02 SeedPlants
MA_10433698g0010 No alias conjugation E2 protein 0.02 SeedPlants
MA_108626g0020 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc06g007510.3.1 No alias conjugation E2 protein 0.08 SeedPlants
Solyc08g008220.3.1 No alias conjugation E2 protein 0.07 SeedPlants
Solyc08g081945.1.1 No alias conjugation E2 protein 0.08 SeedPlants
Solyc12g056100.3.1 No alias conjugation E2 protein 0.05 SeedPlants
Zm00001e027303_P001 No alias conjugation E2 protein 0.02 SeedPlants
Zm00001e027992_P001 No alias conjugation E2 protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
MF GO:0031625 ubiquitin protein ligase binding IPI Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!