AT5G53200 (TRY)

Aliases : TRY

Description : Homeodomain-like superfamily protein

Gene families : OG_01_0003857 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003857_tree ,
OG_02_0002666 (LandPlants) Phylogenetic Tree(s): OG_02_0002666_tree ,
OG_03_0001483 (SeedPlants) Phylogenetic Tree(s): OG_03_0001483_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G53200
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00147p00088570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01030609001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_13973	No alias	no hits & (original description: none)	0.06	Archaeplastida
AMTR_s00147p00088570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	LandPlants
Gb_13973	No alias	no hits & (original description: none)	0.05	LandPlants
AMTR_s00147p00088570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	SeedPlants
Gb_13973	No alias	no hits & (original description: none)	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001708	cell fate specification	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009913	epidermal cell differentiation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010091	trichome branching	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	33	72

External Links

No external refs found!

AT5G53200 (TRY)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation