AT5G53200 (TRY)


Aliases : TRY

Description : Homeodomain-like superfamily protein


Gene families : OG_01_0003857 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003857_tree ,
OG_02_0002666 (LandPlants) Phylogenetic Tree(s): OG_02_0002666_tree ,
OG_03_0001483 (SeedPlants) Phylogenetic Tree(s): OG_03_0001483_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53200
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00088570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01030609001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_13973 No alias no hits & (original description: none) 0.06 Archaeplastida
AMTR_s00147p00088570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 LandPlants
Gb_13973 No alias no hits & (original description: none) 0.05 LandPlants
AMTR_s00147p00088570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 SeedPlants
Gb_13973 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009913 epidermal cell differentiation RCA Interproscan
BP GO:0010091 trichome branching IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 33 72
No external refs found!