Aliases : EDF4, RAV1
Description : AP2-RAV-type transcription factor *(EDF) & original description: none
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g49278 | |
Cluster | HCCA: Cluster_230 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00238950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.04 | OrthoFinder output from all 47 species | |
AT1G68840 | EDF2, AtRAV2,... | related to ABI3/VP1 2 | 0.03 | OrthoFinder output from all 47 species | |
AT3G11580 | No alias | AP2/B3-like transcriptional factor family protein | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11266 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0102.g044523 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.16G035200.1 | TEM1, EDF1,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G072500.1 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g02670 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033902001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g01860.1 | LOC_Os06g01860 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g06120.1 | NGA1, LOC_Os08g06120 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g05740.1 | LOC_Os11g05740 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g06080.1 | LOC_Os12g06080 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
MA_10428163g0010 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.06 | OrthoFinder output from all 47 species | |
MA_10432625g0010 | EDF3 | transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
MA_10436315g0010 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
MA_106270g0010 | EDF4, RAV1 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
MA_20372g0020 | EDF4, RAV1 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g44549 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g09403 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0036.g011516 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g30092 | No alias | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g007000.2.1 | EDF4, RAV1,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.06 | OrthoFinder output from all 47 species | |
Spa_g28812 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g29371 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g30531 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028111_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040214_P001 | NGA3, Zm00001e040214 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041372_P001 | NGA1, Zm00001e041372 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |