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  5. Pir_g49211

Pir_g49211


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0004515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g49211
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
Dac_g13468 ATHANSYNAB, ASA2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12590 ATHANSYNAB, ASA2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_940284g0010 ATHANSYNAB, ASA2 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon... 0.02 OrthoFinder output from all 47 species
Mp2g26760.1 ATHANSYNAB, ASA2 subunit alpha of anthranilate synthase complex 0.02 OrthoFinder output from all 47 species
Sam_g12466 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37596 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006805 Anth_synth_I_N 102 254
IPR015890 Chorismate_C 317 588
No external refs found!