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  5. Pir_g49083

Pir_g49083


Description : not classified & original description: none


Gene families : OG0000447 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g49083
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AT1G11170 No alias Protein of unknown function (DUF707) 0.03 OrthoFinder output from all 47 species
AT3G26440 No alias Protein of unknown function (DUF707) 0.03 OrthoFinder output from all 47 species
AT4G18530 No alias Protein of unknown function (DUF707) 0.02 OrthoFinder output from all 47 species
LOC_Os01g73970.1 LOC_Os01g73970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028465_P001 Zm00001e028465 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR007877 DUF707 63 384
No external refs found!