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  5. Pir_g49052

Pir_g49052


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g49052

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00122370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00107450 MUR3, KAM1,... Cell... 0.02 OrthoFinder output from all 47 species
Aev_g09946 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00337.t1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene59723.t1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060223 No alias not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Cba_g14531 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g044960.1.1 GT18, ATGT18,... Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
Zm00001e000041_P001 Zm00001e000041 Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 29 376
No external refs found!