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  5. Pir_g48887

Pir_g48887


Description : not classified & original description: none


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g48887
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT1G63220 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
Adi_g105361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012188 No alias not classified & original description: CDS=289-603 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.10 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.3 No alias Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
Nbi_g08990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080680.4.1 Solyc08g080680 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Spa_g18382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 41 136
No external refs found!