Smo413463 (PACid_15414617)


Aliases : PACid_15414617

Description : 30.3 signalling.calcium encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. calmodulin 1 (CAM1) CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248) BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1) Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3 Bacteria - 127 Metazoa - 13080 Fungi - 6590 Plants - 6083 Viruses - 0 Other Eukaryotes - 4031 (source: NCBI BLink). & (loc_os01g17190.1 : 208.0


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo413463
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT3G47480 No alias Calcium-binding EF-hand family protein 0.02 Gene family
LOC_Os01g59530 Os01g0810300 30.3 signalling.calcium encodes a calmodulin calmodulin 3 (CAM3) 0.02 Gene family
LOC_Os12g41110 Os12g0603800 30.3 signalling.calcium Encodes a calmodulin-like... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 26 86
No external refs found!