AT5G51230 (AtEMF2, EMF2, VEF2, CYR1)


Aliases : AtEMF2, EMF2, VEF2, CYR1

Description : VEFS-Box of polycomb protein


Gene families : OG_01_0002392 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002392_tree ,
OG_02_0002785 (LandPlants) Phylogenetic Tree(s): OG_02_0002785_tree ,
OG_03_0003732 (SeedPlants) Phylogenetic Tree(s): OG_03_0003732_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51230
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Cre10.g456800 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01004791001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_40733 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.03 Archaeplastida
LOC_Os09g13630.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 Archaeplastida
Pp3c25_12300V3.1 No alias VEFS-Box of polycomb protein 0.02 Archaeplastida
Solyc03g093640.4.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.05 Archaeplastida
Zm00001e005699_P001 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.03 Archaeplastida
GSVIVT01004791001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 LandPlants
Gb_40733 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.03 LandPlants
LOC_Os09g13630.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 LandPlants
Solyc03g093640.4.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.04 LandPlants
Zm00001e005699_P001 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.03 LandPlants
GSVIVT01004791001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 SeedPlants
Gb_40733 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.03 SeedPlants
LOC_Os09g13630.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 SeedPlants
Solyc03g093640.4.1 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 SeedPlants
Zm00001e005699_P001 No alias component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006349 regulation of gene expression by genetic imprinting IMP Interproscan
BP GO:0006349 regulation of gene expression by genetic imprinting RCA Interproscan
BP GO:0009910 negative regulation of flower development IMP Interproscan
BP GO:0010048 vernalization response RCA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019135 Polycomb_protein_VEFS-Box 490 624
No external refs found!