Aliases : CHB2, SWI3B, ATSWI3B
Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g47159 | |
Cluster | HCCA: Cluster_118 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g16327 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g02046 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g03107 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g01970.1 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g13567 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | HCCA |
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0040008 | regulation of growth | IEP | HCCA |
BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
No external refs found! |