Smo412699 (PACid_15413246)


Aliases : PACid_15413246

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12) CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525) BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1) Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615 Bacteria - 304057 Metazoa - 8776 Fungi - 6428 Plants - 5794 Viruses - 2 Other Eukaryotes - 45311 (source: NCBI BLink). & (chl4|516135 : 804.0


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo412699
Cluster HCCA cluster: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.02 Gene family
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.05 Gene family
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Gene family
GSVIVT01017187001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017196001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
GSVIVT01017202001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01033804001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os01g24010 Os01g0342700,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42350 Os01g0609000 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10432311g0010 No alias No description available 0.02 Gene family
MA_124091g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_38272g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo122902 PACid_15401943 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo424639 PACid_15403687 No description available 0.03 Gene family
Smo429390 PACid_15416241 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc08g067620.3.1 Solyc08g067620.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g019620.2.1 Solyc12g019620.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d031724 GRMZM2G477872 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 873 1025
No external refs found!