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  5. Pir_g46276

Pir_g46276


Description : effector receptor *(NLR) & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g46276
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_08935 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_33802 No alias effector receptor (NLR) 0.1 OrthoFinder output from all 47 species
MA_10434210g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10437230g0040 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
MA_112209g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_30664g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_32168g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.07 OrthoFinder output from all 47 species
MA_8647159g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Pir_g37315 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g032200.4.1 Solyc02g032200 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 204 411
IPR001229 Jacalin-like_lectin_dom 588 720
IPR001229 Jacalin-like_lectin_dom 886 1017
IPR001229 Jacalin-like_lectin_dom 1050 1165
IPR001229 Jacalin-like_lectin_dom 1184 1309
IPR001229 Jacalin-like_lectin_dom 442 570
IPR001229 Jacalin-like_lectin_dom 739 867
IPR000157 TIR_dom 7 176
No external refs found!