AMTR_s00014p00252440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.135

Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG_01_0006286 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006286_tree ,
OG_02_0007694 (LandPlants) Phylogenetic Tree(s): OG_02_0007694_tree ,
OG_03_0007497 (SeedPlants) Phylogenetic Tree(s): OG_03_0007497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00252440
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Archaeplastida
Cre01.g036100 No alias No description available 0.04 Archaeplastida
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.15 Archaeplastida
Gb_09523 No alias no hits & (original description: none) 0.15 Archaeplastida
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.2 Archaeplastida
MA_10429760g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10429760g0020 No alias no hits & (original description: none) 0.19 Archaeplastida
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.1 Archaeplastida
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Zm00001e012236_P003 No alias no hits & (original description: none) 0.09 Archaeplastida
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.05 LandPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.14 LandPlants
Gb_09523 No alias no hits & (original description: none) 0.14 LandPlants
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.19 LandPlants
MA_10429760g0010 No alias no hits & (original description: none) 0.04 LandPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.16 LandPlants
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.1 LandPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.15 LandPlants
Zm00001e012236_P003 No alias no hits & (original description: none) 0.09 LandPlants
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.05 SeedPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.14 SeedPlants
Gb_09523 No alias no hits & (original description: none) 0.14 SeedPlants
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.18 SeedPlants
MA_10429760g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.15 SeedPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.14 SeedPlants
Zm00001e012236_P003 No alias no hits & (original description: none) 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 164 195
IPR001680 WD40_repeat 203 238
IPR001680 WD40_repeat 389 409
IPR001680 WD40_repeat 418 453
No external refs found!