AT5G49890 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : chloride channel C


Gene families : OG_01_0000546 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000546_tree ,
OG_02_0001113 (LandPlants) Phylogenetic Tree(s): OG_02_0001113_tree ,
OG_03_0001188 (SeedPlants) Phylogenetic Tree(s): OG_03_0001188_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49890
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT5G33280 No alias Voltage-gated chloride channel family protein 0.04 Archaeplastida
Cpa|evm.model.tig00021357.33 No alias Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre09.g404100 No alias Solute transport.carrier-mediated transport.CLC anion... 0.02 Archaeplastida
Cre13.g574000 No alias Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_03967 No alias anion channel / anion:proton antiporter (CLC) 0.03 Archaeplastida
Gb_03968 No alias anion channel / anion:proton antiporter (CLC) 0.04 Archaeplastida
MA_781671g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_785982g0010 No alias anion channel / anion:proton antiporter (CLC) 0.03 Archaeplastida
Mp1g24100.1 No alias anion channel / anion:proton antiporter (CLC) 0.03 Archaeplastida
Pp3c23_5320V3.1 No alias chloride channel D 0.03 Archaeplastida
AMTR_s00099p00074960 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.CLC anion... 0.03 LandPlants
Gb_03967 No alias anion channel / anion:proton antiporter (CLC) 0.03 LandPlants
LOC_Os04g55210.1 No alias anion channel / anion:proton antiporter (CLC) 0.03 LandPlants
LOC_Os08g20570.1 No alias anion channel / anion:proton antiporter (CLC) 0.02 LandPlants
Mp3g25240.1 No alias anion channel / anion:proton antiporter (CLC) 0.02 LandPlants
AMTR_s00099p00074960 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.CLC anion... 0.03 SeedPlants
Gb_03967 No alias anion channel / anion:proton antiporter (CLC) 0.03 SeedPlants
LOC_Os04g55210.1 No alias anion channel / anion:proton antiporter (CLC) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISS Interproscan
MF GO:0005253 anion channel activity ISS Interproscan
CC GO:0005622 intracellular anatomical structure TAS Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0006821 chloride transport ISS Interproscan
CC GO:0009705 plant-type vacuole membrane IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000644 CBS_dom 715 763
IPR001807 Cl-channel_volt-gated 151 567
No external refs found!