1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g45853

Pir_g45853


Description : effector receptor *(NLR) & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45853
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00146250 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.02 OrthoFinder output from all 47 species
AT1G63870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT2G20142 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 OrthoFinder output from all 47 species
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G40100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41550 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g088609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48806.t1 Aspi01Gene48806 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G007100.1 Ceric.08G007100 not classified & original description: pacid=50638446... 0.06 OrthoFinder output from all 47 species
Ceric.1Z038400.1 Ceric.1Z038400 not classified & original description: pacid=50622569... 0.03 OrthoFinder output from all 47 species
Ehy_g25372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003262001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01025907001 TAO1 External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01026003001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01036408001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Gb_02566 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_03482 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_31442 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_33268 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_36253 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_40546 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10427224g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10430440g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435728g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_123242g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_157917g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_20580g0040 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_497369g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_5053586g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_9584314g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g12589 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g42612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49161 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50105 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51654 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g066020.3.1 Solyc01g066020 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc01g102880.3.1 Solyc01g102880 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc07g063360.1.1 Solyc07g063360 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc09g092410.4.1 Solyc09g092410 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc12g096900.2.1 AtPP2-B10,... effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Spa_g07632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035278_P001 Zm00001e035278 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 258 302
IPR000157 TIR_dom 76 246
No external refs found!