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  5. Pir_g45370

Pir_g45370


Description : not classified & original description: none


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45370

Target Alias Description ECC score Gene Family Method Actions
Adi_g080807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28047.t1 Aspi01Gene28047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37633.t1 Aspi01Gene37633 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38340.t1 CRK8, Aspi01Gene38340 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49989.t1 ATARL1, ARF3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67798.t1 Aspi01Gene67798 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g35635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_11108 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
MA_10585g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g21615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_770V3.1 Pp3c16_770 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c17_21230V3.1 Pp3c17_21230 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c18_5410V3.1 Pp3c18_5410 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c24_14150V3.1 Pp3c24_14150 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c24_5020V3.1 Pp3c24_5020 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c25_8680V3.1 Pp3c25_8680 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c2_37320V3.1 Pp3c2_37320 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c9_7160V3.1 Pp3c9_7160 No annotation 0.01 OrthoFinder output from all 47 species
Solyc01g016305.1.1 Solyc01g016305 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 1 88
No external refs found!