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  5. Pir_g45260

Pir_g45260


Description : core component *(NHP2) of H/ACA snoRNP RNA pseudouridylation complex & original description: none


Gene families : OG0004004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45260

Target Alias Description ECC score Gene Family Method Actions
Ala_g21070 No alias core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
Cba_g23248 No alias core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
Ceric.08G019800.1 Ceric.08G019800 core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01008187001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
MA_670271g0010 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
Spa_g07207 No alias core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 37 123
No external refs found!