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  5. Pir_g44975

Pir_g44975 (ATCNGC3, CNGC3, CNGC3.C)


Aliases : ATCNGC3, CNGC3, CNGC3.C

Description : not classified & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44975

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00063110 DND1, ATCNGC2,... Solute transport.channels.VIC superfamily.cyclic... 0.04 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.02 OrthoFinder output from all 47 species
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.03 OrthoFinder output from all 47 species
Adi_g105580 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Adi_g105581 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34084 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Cba_g13170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07103 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032309001 ATCNGC17, CNGC17 Solute transport.channels.VIC superfamily.cyclic... 0.04 OrthoFinder output from all 47 species
LOC_Os05g42250.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Len_g23962 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Pir_g51567 CNGC19, ATCNGC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30209 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!