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  5. Pir_g44811

Pir_g44811 (MEE33, MSD1, ATMSD1)


Aliases : MEE33, MSD1, ATMSD1

Description : manganese superoxide dismutase *(MSD) & original description: none


Gene families : OG0002265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44811
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Als_g37021 MEE33, MSD1, ATMSD1 manganese superoxide dismutase *(MSD) & original... 0.01 OrthoFinder output from all 47 species
Ceric.21G003000.1 MEE33, MSD1,... manganese superoxide dismutase *(MSD) & original... 0.08 OrthoFinder output from all 47 species
Ehy_g14172 MEE33, MSD1, ATMSD1 manganese superoxide dismutase *(MSD) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13402 MEE33, MSD1, ATMSD1 manganese superoxide dismutase *(MSD) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010581 MEE33, MSD1, ATMSD1 manganese superoxide dismutase *(MSD) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e031374_P001 MEE33, MSD1,... manganese superoxide dismutase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019832 Mn/Fe_SOD_C 120 222
IPR019831 Mn/Fe_SOD_N 34 110
No external refs found!