AT5G48500


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0005748 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005748_tree ,
OG_02_0003890 (LandPlants) Phylogenetic Tree(s): OG_02_0003890_tree ,
OG_03_0002472 (SeedPlants) Phylogenetic Tree(s): OG_03_0002472_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48500
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006232001 No alias No description available 0.03 Archaeplastida
LOC_Os01g68570.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g22960.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc06g083080.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021497_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e036079_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e039646_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
GSVIVT01006232001 No alias No description available 0.03 LandPlants
GSVIVT01026373001 No alias No description available 0.02 LandPlants
LOC_Os01g68570.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os11g22960.1 No alias no hits & (original description: none) 0.06 LandPlants
LOC_Os12g22800.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc04g050790.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e021497_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e039646_P001 No alias no hits & (original description: none) 0.03 LandPlants
GSVIVT01006232001 No alias No description available 0.03 SeedPlants
LOC_Os11g22960.1 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e021497_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e039646_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!