Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.527
Description : Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana
Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree ,
OG_03_0001479 (SeedPlants) Phylogenetic Tree(s): OG_03_0001479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00001p00272430 | |
Cluster | HCCA: Cluster_58 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00034670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.05 | Archaeplastida | |
GSVIVT01029248001 | No alias | Pentatricopeptide repeat-containing protein At2g18940,... | 0.04 | Archaeplastida | |
Gb_07042 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | Archaeplastida | |
Gb_13589 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | Archaeplastida | |
LOC_Os05g19380.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | Archaeplastida | |
LOC_Os07g40120.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | Archaeplastida | |
MA_8893308g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | Archaeplastida | |
AMTR_s00029p00034670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.03 | LandPlants | |
GSVIVT01029248001 | No alias | Pentatricopeptide repeat-containing protein At2g18940,... | 0.04 | LandPlants | |
Gb_07042 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | LandPlants | |
Gb_13589 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | LandPlants | |
LOC_Os05g19380.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | LandPlants | |
MA_8893308g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | LandPlants | |
AMTR_s00029p00034670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.03 | SeedPlants | |
GSVIVT01029248001 | No alias | Pentatricopeptide repeat-containing protein At2g18940,... | 0.02 | SeedPlants | |
Gb_07042 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | SeedPlants | |
Gb_13589 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | SeedPlants | |
LOC_Os07g40120.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | SeedPlants | |
MA_6146g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | SeedPlants | |
MA_8893308g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | SeedPlants | |
Zm00001e030419_P001 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | SeedPlants | |
Zm00001e035434_P001 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | SeedPlants |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 723 | 772 |
IPR002885 | Pentatricopeptide_repeat | 408 | 455 |
IPR002885 | Pentatricopeptide_repeat | 653 | 702 |
IPR002885 | Pentatricopeptide_repeat | 338 | 386 |
IPR002885 | Pentatricopeptide_repeat | 482 | 527 |
IPR002885 | Pentatricopeptide_repeat | 235 | 280 |
IPR002885 | Pentatricopeptide_repeat | 201 | 230 |
IPR002885 | Pentatricopeptide_repeat | 621 | 651 |
IPR002885 | Pentatricopeptide_repeat | 306 | 336 |
No external refs found! |