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  5. Pir_g44351

Pir_g44351


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44351

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G19140 DNF RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G30370 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 OrthoFinder output from all 47 species
Adi_g011787 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ala_g05267 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g22041 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28895.t1 BRH1, Aspi01Gene28895 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70383.t1 Aspi01Gene70383 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58164 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Ceric.13G057600.1 Ceric.13G057600 not classified & original description: pacid=50636796... 0.06 OrthoFinder output from all 47 species
Dac_g07105 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Dac_g10852 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g48934 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06688 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01016564001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_04647 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_40644 BRH1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g11480.1 LOC_Os01g11480 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g61470.1 LOC_Os01g61470 RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
LOC_Os02g36330.1 LOC_Os02g36330 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g45390.1 LOC_Os02g45390 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g57460.1 LOC_Os02g57460 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29676.1 LOC_Os05g29676 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os05g39260.1 LOC_Os05g39260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g16060.1 LOC_Os06g16060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34560.1 ATL43, LOC_Os06g34560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34620.1 LOC_Os06g34620 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g23799 BRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_177673g0010 ATL2, TL2 RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_38690g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_393170g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_6007471g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_8693914g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g14075 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ore_g16147 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g29674 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g32586 DEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15928 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ppi_g02738 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Sam_g51254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo423895 ATL43 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc04g074790.3.1 Solyc04g074790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g007230.2.1 ATL2, TL2, Solyc06g007230 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Spa_g09550 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Spa_g55527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Tin_g11104 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.07 OrthoFinder output from all 47 species
Zm00001e014286_P001 Zm00001e014286 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022175_P001 Zm00001e022175 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023832_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e034025_P001 RHA3A, Zm00001e034025 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038229_P001 Zm00001e038229 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 101 144
No external refs found!