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  5. Pir_g44056

Pir_g44056 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE

Description : not classified & original description: none


Gene families : OG0001021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44056

Target Alias Description ECC score Gene Family Method Actions
Cba_g64727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24305 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35018 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40734 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 4 103
No external refs found!