AT5G47390

Description : myb-like transcription factor family protein

Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0000426 (LandPlants) Phylogenetic Tree(s): OG_02_0000426_tree ,
OG_03_0000467 (SeedPlants) Phylogenetic Tree(s): OG_03_0000467_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47390
Cluster	HCCA: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g04930.1	No alias	transcription factor (MYB-related)	0.06	Archaeplastida
LOC_Os01g09280.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os01g63460.1	No alias	transcription factor (MYB-related)	0.05	Archaeplastida
LOC_Os04g27410.1	No alias	transcription factor (MYB-related)	0.05	Archaeplastida
LOC_Os05g10690.1	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
LOC_Os05g37050.1	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
LOC_Os05g37060.1	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
MA_9437011g0010	No alias	transcription factor (MYB-related)	0.05	Archaeplastida
Pp3c4_5410V3.1	No alias	myb-like transcription factor family protein	0.03	Archaeplastida
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e037865_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os05g10690.1	No alias	transcription factor (MYB-related)	0.02	LandPlants
Pp3c4_5410V3.1	No alias	myb-like transcription factor family protein	0.03	LandPlants
Smo439294	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	LandPlants
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.03	LandPlants
Zm00001e037865_P001	No alias	transcription factor (MYB-related)	0.03	LandPlants
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.01	SeedPlants
Zm00001e037865_P001	No alias	transcription factor (MYB-related)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	97	141

External Links

No external refs found!

AT5G47390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation