AT5G47370 (HAT2)

Aliases : HAT2

Description : Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein

Gene families : OG_01_0000355 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000355_tree ,
OG_02_0000278 (LandPlants) Phylogenetic Tree(s): OG_02_0000278_tree ,
OG_03_0000297 (SeedPlants) Phylogenetic Tree(s): OG_03_0000297_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47370
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g45570.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_12174g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_126021g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_57689g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_860238g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c11_21650V3.1	No alias	homeobox from Arabidopsis thaliana	0.04	Archaeplastida
Pp3c11_21670V3.1	No alias	homeobox from Arabidopsis thaliana	0.04	Archaeplastida
Solyc05g008050.3.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
Zm00001e000928_P002	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e013141_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e020345_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os01g45570.1	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
MA_12174g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
MA_126021g0010	No alias	no hits & (original description: none)	0.03	LandPlants
MA_57689g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
MA_78381g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
MA_860238g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Pp3c11_21650V3.1	No alias	homeobox from Arabidopsis thaliana	0.04	LandPlants
Pp3c11_21670V3.1	No alias	homeobox from Arabidopsis thaliana	0.04	LandPlants
Solyc05g008050.3.1	No alias	transcription factor (HD-ZIP I/II)	0.07	LandPlants
Zm00001e000928_P002	No alias	transcription factor (HD-ZIP I/II)	0.04	LandPlants
Zm00001e020345_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	LandPlants
Zm00001e022765_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
GSVIVT01002447001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	SeedPlants
GSVIVT01018247001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	SeedPlants
MA_57689g0010	No alias	transcription factor (HD-ZIP I/II)	0.06	SeedPlants
MA_78381g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	SeedPlants
MA_860238g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	SeedPlants
Zm00001e022765_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009641	shade avoidance	IEP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009734	auxin-activated signaling pathway	IEP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009826	unidimensional cell growth	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045892	negative regulation of transcription, DNA-templated	IMP	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006712	HD-ZIP_N	2	91
IPR001356	Homeobox_dom	129	183
IPR003106	Leu_zip_homeo	185	218

External Links

No external refs found!

AT5G47370 (HAT2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation