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  5. Pir_g43396

Pir_g43396


Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g43396

Target Alias Description ECC score Gene Family Method Actions
AT1G68590 No alias Ribosomal protein PSRP-3/Ycf65 0.04 OrthoFinder output from all 47 species
Als_g28969 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g07615 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g08130 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g32123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G082200.1 Ceric.29G082200 component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g00469 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g05305 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os04g38750.1 LOC_Os04g38750 component psPSRP3 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
MA_10432955g0010 No alias component psPSRP3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp2g13520.1 No alias component psPSRP3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Ore_g05910 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017327 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Tin_g12630 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e007903_P001 Zm00001e007903 component psPSRP3 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e041019_P001 Zm00001e041019 component psPSRP3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR006924 Ribosomal_PSRP3/Ycf65 142 188
No external refs found!