AT5G47210


Description : Hyaluronan / mRNA binding family


Gene families : OG_01_0002128 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002128_tree ,
OG_02_0001404 (LandPlants) Phylogenetic Tree(s): OG_02_0001404_tree ,
OG_03_0040808 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47210
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002125001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.11 Archaeplastida
Gb_32212 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.02 Archaeplastida
MA_9567870g0010 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.07 Archaeplastida
Mp4g04410.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Pp3c1_6130V3.1 No alias Hyaluronan / mRNA binding family 0.04 Archaeplastida
Pp3c2_30970V3.1 No alias Hyaluronan / mRNA binding family 0.05 Archaeplastida
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.07 Archaeplastida
Solyc08g007220.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.07 Archaeplastida
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 Archaeplastida
GSVIVT01002125001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.1 LandPlants
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.11 LandPlants
Gb_32212 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.02 LandPlants
MA_9567870g0010 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.06 LandPlants
Mp4g04410.1 No alias no hits & (original description: none) 0.09 LandPlants
Pp3c1_6130V3.1 No alias Hyaluronan / mRNA binding family 0.04 LandPlants
Pp3c2_30970V3.1 No alias Hyaluronan / mRNA binding family 0.05 LandPlants
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.07 LandPlants
Solyc08g007220.3.1 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.07 LandPlants
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006164 purine nucleotide biosynthetic process RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 147 257
IPR019084 Stm1-like_N 1 67
No external refs found!