Smo411220 (PACid_15406937)


Aliases : PACid_15406937

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances LOCATED IN: endomembrane system EXPRESSED IN: 10 plant structures EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871) BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1) Has 368280 Blast hits to 339015 proteins in 4019 species: Archae - 6650 Bacteria - 293315 Metazoa - 9188 Fungi - 6366 Plants - 5378 Viruses - 18 Other Eukaryotes - 47365 (source: NCBI BLink). & (loc_os06g51460.1 : 909.0


Gene families : OG_01_0001214 (Gene family) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo411220
Cluster HCCA cluster: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
MA_10426482g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc04g025180.3.1 Solyc04g025180.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g075020.3.1 Solyc06g075020.3 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc11g069820.2.1 Solyc11g069820.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d004335 GRMZM5G803404 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d046068 GRMZM2G166889 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 477 630
No external refs found!