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  5. Pir_g42634

Pir_g42634


Description : not classified & original description: none


Gene families : OG0002693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g42634

Target Alias Description ECC score Gene Family Method Actions
AT5G55100 No alias SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g104718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13396 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0198.g057435 No alias not classified & original description: CDS=75-2141 0.01 OrthoFinder output from all 47 species
Ceric.22G007400.1 Ceric.22G007400 not classified & original description: pacid=50614788... 0.02 OrthoFinder output from all 47 species
Dcu_g42083 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g24882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17246 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17247 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028122_P004 Zm00001e028122 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 55 133
No external refs found!