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  5. Pir_g41825

Pir_g41825 (MSG2, IAA19)


Aliases : MSG2, IAA19

Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41825

Target Alias Description ECC score Gene Family Method Actions
Als_g45911 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23058.t1 IAA8, Aspi01Gene23058 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47408 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g02643 IAA2 transcriptional repressor *(IAA/AUX) & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os03g53150.1 IAA16, LOC_Os03g53150 Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40890.1 IAA16, LOC_Os12g40890 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
MA_203952g0010 IAA9 Auxin-responsive protein IAA9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43706 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g65026 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19076 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 41 142
No external refs found!