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  5. Pir_g41507

Pir_g41507 (NF-YB3)


Aliases : NF-YB3

Description : component *(NF-YB) of NF-Y transcription factor complex & original description: none


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41507

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
GSVIVT01017741001 NF-YB5 RNA biosynthesis.transcriptional activation.NF-Y... 0.04 OrthoFinder output from all 47 species
LOC_Os01g70880.1 NF-YB5, LOC_Os01g70880 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Mp4g13360.1 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Sam_g07511 No alias component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Solyc01g067130.4.1 NF-YB5, Solyc01g067130 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Solyc06g009010.1.1 NF-YB5, Solyc06g009010 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e010728_P001 NF-YB3, Zm00001e010728 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e015699_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 30 94
No external refs found!