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  5. Pir_g40986

Pir_g40986


Description : not classified & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40986
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Ala_g12004 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025366001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g31980.1 LOC_Os09g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g57085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_279737g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 111 157
IPR004146 DC1 167 214
IPR004146 DC1 3 46
IPR004146 DC1 56 100
IPR001841 Znf_RING 301 343
No external refs found!