AT5G44520

Description : NagB/RpiA/CoA transferase-like superfamily protein

Gene families : OG_01_0009051 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009051_tree ,
OG_02_0010771 (LandPlants) Phylogenetic Tree(s): OG_02_0010771_tree ,
OG_03_0012896 (SeedPlants) Phylogenetic Tree(s): OG_03_0012896_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44520
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01037941001	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.03	Archaeplastida
LOC_Os03g56869.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.07	Archaeplastida
Solyc02g069620.4.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.04	Archaeplastida
Zm00001e011922_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os03g56869.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.07	LandPlants
Solyc02g069620.4.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.03	LandPlants
Zm00001e011922_P001	No alias	no hits & (original description: none)	0.03	LandPlants
GSVIVT01037941001	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.02	SeedPlants
LOC_Os03g56869.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.07	SeedPlants
Solyc02g069620.4.1	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.03	SeedPlants
Zm00001e011922_P001	No alias	no hits & (original description: none)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004788	Ribose5P_isomerase_type_A	86	270

External Links

No external refs found!

AT5G44520

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation