AT5G44500

Description : Small nuclear ribonucleoprotein family protein

Gene families : OG_01_0004360 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004360_tree ,
OG_02_0004546 (LandPlants) Phylogenetic Tree(s): OG_02_0004546_tree ,
OG_03_0006110 (SeedPlants) Phylogenetic Tree(s): OG_03_0006110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44500
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00021463.4	No alias	RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	ISS	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	9	84

External Links

No external refs found!