AT5G44390


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000172 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000172_tree ,
OG_02_0000076 (LandPlants) Phylogenetic Tree(s): OG_02_0000076_tree ,
OG_03_0000069 (SeedPlants) Phylogenetic Tree(s): OG_03_0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44390
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00038p00163720 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.09 Archaeplastida
AT1G26410 No alias FAD-binding Berberine family protein 0.07 Archaeplastida
AT1G26420 No alias FAD-binding Berberine family protein 0.09 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G30730 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT4G20830 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT4G20860 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
GSVIVT01021720001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021726001 No alias Berberine bridge enzyme-like 14 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os02g14090.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os08g06170.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_10428737g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 LandPlants
AT1G26380 No alias FAD-binding Berberine family protein 0.08 LandPlants
AT1G26410 No alias FAD-binding Berberine family protein 0.07 LandPlants
AT1G26420 No alias FAD-binding Berberine family protein 0.08 LandPlants
AT1G30700 No alias FAD-binding Berberine family protein 0.03 LandPlants
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 LandPlants
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os02g14090.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os08g06170.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.02 LandPlants
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 SeedPlants
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 SeedPlants
AT1G26380 No alias FAD-binding Berberine family protein 0.07 SeedPlants
AT1G26390 No alias FAD-binding Berberine family protein 0.03 SeedPlants
AT1G26410 No alias FAD-binding Berberine family protein 0.07 SeedPlants
AT1G26420 No alias FAD-binding Berberine family protein 0.07 SeedPlants
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 SeedPlants
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os08g06170.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 87 224
IPR012951 BBE 480 538
No external refs found!