1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g40048

Pir_g40048


Description : recruiting factor *(VETH) of Exocyst complex & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40048
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Aop_g10655 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01374.t1 Aspi01Gene01374 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G092800.1 Ceric.13G092800 microtubule assembly factor *(TCS1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G013900.1 Ceric.26G013900 microtubule assembly factor *(TCS1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G017100.1 Ceric.31G017100 microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g28960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 319 388
IPR008587 FPP_plant 85 183
IPR008587 FPP_plant 199 271
No external refs found!