Pir_g40025


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000309 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40025

Target Alias Description ECC score Gene Family Method Actions
Aev_g26156 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g11886 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g18322 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Als_g03478 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Als_g38436 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Aob_g00408 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aop_g02318 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 39 species
Aspi01Gene38161.t1 Aspi01Gene38161 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aspi01Gene72593.t1 Aspi01Gene72593 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Azfi_s0005.g009357 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g49596 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g50261 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g03143 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 39 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Len_g02481 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Lfl_g27083 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Lfl_g31513 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Ore_g36770 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pp3c11_630V3.1 Pp3c11_630 Ribosomal L22e protein family 0.03 OrthoFinder output from all 39 species
Pp3c11_680V3.1 Pp3c11_680 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.03 OrthoFinder output from all 39 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.04 OrthoFinder output from all 39 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.04 OrthoFinder output from all 39 species
Sacu_v1.1_s0167.g024206 AGL26 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sam_g13724 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Spa_g05462 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Spa_g22846 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Spa_g25050 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Spa_g28148 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 41 150
No external refs found!