AT5G44260


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0001103 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001103_tree ,
OG_02_0000849 (LandPlants) Phylogenetic Tree(s): OG_02_0000849_tree ,
OG_03_0000726 (SeedPlants) Phylogenetic Tree(s): OG_03_0000726_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44260
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT4G29190 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Archaeplastida
GSVIVT01035331001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 Archaeplastida
Gb_20654 No alias mRNA-binding regulatory factor (TZF) 0.02 Archaeplastida
MA_68666g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo443970 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 Archaeplastida
GSVIVT01035331001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 LandPlants
Gb_20654 No alias mRNA-binding regulatory factor (TZF) 0.02 LandPlants
MA_68666g0010 No alias no hits & (original description: none) 0.03 LandPlants
Smo441947 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 LandPlants
Smo443970 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 LandPlants
GSVIVT01013901001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 SeedPlants
GSVIVT01035331001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 SeedPlants
Gb_20654 No alias mRNA-binding regulatory factor (TZF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000571 Znf_CCCH 104 126
No external refs found!