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  5. Pir_g39777

Pir_g39777


Description : bHLH-type transcription factor & original description: none


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39777

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G71200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01018461001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_26735 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_938775g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pir_g47256 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g079680.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
Solyc12g010595.1.1 Solyc12g010595 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 88 139
No external refs found!