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Description : not classified & original description: none
Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g39731 | |
| Cluster | HCCA: Cluster_150 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00271140 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00192080 | evm_27.TU.AmTr_v1... | Chitinase 1 OS=Tulipa bakeri | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00192280 | evm_27.TU.AmTr_v1... | Chitinase 1 OS=Tulipa bakeri | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00062800 | evm_27.TU.AmTr_v1... | Chitinase 2 OS=Tulipa bakeri | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g049053 | No alias | 2S globulin seed storage protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060075 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g32400 | No alias | 2S globulin seed storage protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z224900.1 | Ceric.1Z224900 | 2S globulin seed storage protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g34761 | No alias | 2S globulin seed storage protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g57390.1 | LOC_Os01g57390 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g57400.1 | LOC_Os01g57400 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g50581 | No alias | 2S globulin seed storage protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32653 | No alias | 2S globulin seed storage protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03759 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g32505 | No alias | 2S globulin seed storage protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo15493 | No alias | Chitinase 1 OS=Tulipa bakeri | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40975 | No alias | 2S globulin seed storage protein & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018392 | LysM_dom | 60 | 100 |
| No external refs found! |