AT5G43780 (APS4)

Aliases : APS4

Description : Pseudouridine synthase/archaeosine transglycosylase-like family protein

Gene families : OG_01_0002147 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002147_tree ,
OG_02_0002608 (LandPlants) Phylogenetic Tree(s): OG_02_0002608_tree ,
OG_03_0002534 (SeedPlants) Phylogenetic Tree(s): OG_03_0002534_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G43780
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00269930	evm_27.TU.AmTr_v1...	Nutrient uptake.sulfur assimilation.sulfate...	0.04	Archaeplastida
Cpa\|evm.model.tig00000042.56	No alias	Nutrient uptake.sulfur assimilation.sulfate...	0.01	Archaeplastida
LOC_Os03g53230.1	No alias	ATP sulfurylase	0.02	Archaeplastida
Solyc09g082860.3.1	No alias	ATP sulfurylase	0.02	Archaeplastida
Zm00001e005638_P001	No alias	ATP sulfurylase	0.03	Archaeplastida
Zm00001e028386_P001	No alias	ATP sulfurylase	0.02	Archaeplastida
AMTR_s00002p00269930	evm_27.TU.AmTr_v1...	Nutrient uptake.sulfur assimilation.sulfate...	0.02	LandPlants
LOC_Os03g53230.1	No alias	ATP sulfurylase	0.02	LandPlants
Zm00001e005638_P001	No alias	ATP sulfurylase	0.03	LandPlants
AMTR_s00002p00269930	evm_27.TU.AmTr_v1...	Nutrient uptake.sulfur assimilation.sulfate...	0.02	SeedPlants
LOC_Os03g53230.1	No alias	ATP sulfurylase	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	TAS	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004779	sulfate adenylyltransferase activity	None	Extended
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IMP	Interproscan
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070566	adenylyltransferase activity	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024951	Sulfurylase_cat_dom	227	448
IPR025980	ATP-Sase_PUA-like_dom	54	217

External Links

No external refs found!

AT5G43780 (APS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation