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  5. Pir_g39083

Pir_g39083


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39083

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Als_g22007 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g33847 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05983 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21949.t1 Aspi01Gene21949 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33723.t1 Aspi01Gene33723 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35965.t1 Aspi01Gene35965 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45749.t1 Aspi01Gene45749 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48429.t1 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007457 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g03918 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Cba_g05727 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g11638 No alias transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g13122 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Gb_27262 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.12 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g03175 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g06998 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g27534 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Nbi_g12621 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20359 KAN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23688 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09624 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ppi_g30894 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004589 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016001 No alias not classified & original description: CDS=379-1050 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024956 No alias not classified & original description: CDS=676-2103 0.03 OrthoFinder output from all 47 species
Sam_g13225 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc06g066180.4.1 Solyc06g066180 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Solyc11g067280.2.1 Solyc11g067280 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g22118 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e027318_P001 Zm00001e027318 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e031978_P001 Zm00001e031978 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033396_P003 PHR1, AtPHR1,... G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 433 479
IPR001005 SANT/Myb 352 402
No external refs found!